Circbank id
WebDec 11, 2024 · According to data from the circBank database, the m 6 A levels for the 4 circRNAs were obtained and are shown in Table 1. We then analyzed their m 6 A modification sites using the SRAMP predictor tool. Only high confidence m 6 A sites are listed (Table 2). It was found that hsa_circ_0127664 and hsa_circ_0008362 had a … WebOct 1, 2024 · The purpose of this study was to investigate the role of circular RNA COL6A3_030 (circBase ID: hsa_circ_0006401; circRNADb ID: hsa_circ_28198; circBank ID: hsa_circCOL6A3_030) in GC metastasis. qRT-PCR analysis using back-splicing primers and Sanger sequencing of PCR products were performed to identify circCOL6A3_030 in …
Circbank id
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WebOct 1, 2024 · For example, circCOL6A3_030 (circBase ID: hsa_circ_0006401; circRNADb ID: hsa_circ_28198; circBank ID: hsa_circCOL6A3_030) is derived from the reverse splicing of COL6A3 mRNA (from 3 exons (exon 4–6)) on chromosome 2q37.3, with a total length of 761 nucleotides (circRNADb website). WebSep 16, 2024 · Second, we annotated the ribo-circRNA with the circRNA ID in different resources such as circBase, CircBank and RefSeq. Third, we installed the DeepLoc (version 1.0) tool. The DeepLoc with default parameters was used to differentiate ten subcellular localizations of those putative peptides and proteins based on their amino …
WebOct 30, 2024 · symbol, circbank ID or circBase ID (Figure 3(a)). Users also can perform an advanced search through selecting other fea-tures of circRNAs including conservation, … WebJun 7, 2024 · In addition, Primer3 was utilized to design the divergent primers of circITGB1 (CircBank ID hsa_circ_0018148), circARL6IP1 (CircBank ID hsa_circ_0038229) and circH-NRNPF (CircBank ID hsa_circ_0018263). After obtaining the divergent primer sets as aforementioned, CircPrimer 2.0 software ...
WebApr 25, 2024 · Bioinformatics data [12] showed that hsa_circ_0013561 (Circbank [13] ID: hsa_circSLC16A1_004) is derived from the Solute Carrier Family 16 Member 1 (SLC16A1) gene. This host gene located on chr1 ... WebcircBank is a comprehensive database of human circRNA which included more than 140,000 human annotated circRNA from different source. A novel nomenclature system … circBank is a comprehensive database of human circRNA which included more … Protein coding potential coding_prob >=. Search Export Copyright 2024 © … Protein coding potention coding_prob >=. Search Copyright 2024 © Guangzhou … Circbank download files are for non-commercial use only. Any other use … Users can also search circRNA under “miRNA” page. The “miRNA” page was …
WebCircYap (circBank ID: hsa circYAP1 008) inhibits the initiation of Yap translation by binding to both eIF4G and PABP. Importantly, Yap activation can promote the proliferation, inhibit the apoptosis and facilitate the metastasis of cancer cells [32]. Although circRNAs can act as protein sponges, we do not know the extent to which low expression ...
http://www.circbank.cn/infoCirc.html?id=hsa_circHIPK3_001 cib bank internshipWebWhat does the abbreviation CIRC stand for? Meaning: circular. dgccrf chaine froidWebCCAC1 (circBase ID: hsa_circ_0043469; circBank ID: hsa_ circERBB2_014) is located on chr17: 37880978-37882106 and looped by exons 23-26 of ERBB2. The spliced variant of circ-CCAC1 is 565 nucleotides long. Interestingly, we found circ-CCAC1 was also remarkably increased in ACC, which is related to poor prognosis among ACC patients. dgccrf charenteWebJun 28, 2024 · 在搜索界面提供许多不同的检索选项,包括Gene name(输入circRNA的宿主基因名称进行查询),circBank ID,circBase ID(上文 … cib bank sopron loginWebCN109285587A CN202411221928.7A CN202411221928A CN109285587A CN 109285587 A CN109285587 A CN 109285587A CN 202411221928 A CN202411221928 A CN 202411221928A CN 109285587 A CN109285587 A CN 109285587A Authority CN China Prior art keywords circrna circbank gene database systems data Prior art date 2024-10 … dgccrf charlevillehttp://www.circbank.cn/searchMiRNA.html cib bank of the westWebJun 21, 2024 · 第一步输入环状RNA ID, 第二步选择物种,第三步选择细胞系,可以多选,第四步选择图表类型,然后点击 Draw 按钮,在右边的面板会显示对应的结果。 通过该数据库的在线工具,可以方便的探究不同物种的环状RNA和不同细胞系中环状RNA的表达量。 ·end· dgccrf ain